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  5. Vocar.0003s0420.1

Vocar.0003s0420.1 (32889197)


Aliases : 32889197

Description : AAA domain; RNA ligase domain, REL/Rln2 [Interproscan].


Gene families : OG_01_0005276 (OrthoFinder) Phylogenetic Tree(s): OG0005276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0003s0420.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cre05.g239450 30783392 No description available 0.05 OrthoFinder
EOD15914 No alias AAA domain; RNA ligase domain, REL/Rln2 [Interproscan]. 0.03 OrthoFinder
EOD30936 No alias AAA domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015703 chromate transport IEP Enrichment
InterPro domains Description Start Stop
IPR021122 RNA_ligase_dom_REL/Rnl2 41 203
No external refs found!