1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0003s0172.1

Vocar.0003s0172.1 (32888906)


Aliases : 32888906

Description : SBP domain [Interproscan].


Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0003s0172.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278229 30778862 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder
Cre16.g692500 30777567 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder
Cz02g40170.t1 No alias SBP domain [Interproscan]. 0.07 OrthoFinder
Transcript_contig_59102 59102 SBP domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_82198 82198 SBP domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_84332 84332 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_85930 85930 SBP domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61318.1_752 PRW61318 Squamosa promoter binding 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR004333 SBP_dom 154 227
No external refs found!