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  5. Vocar.0003s0165.1

Vocar.0003s0165.1 (32889359)


Aliases : 32889359

Description : Ribosomal protein L38e [Interproscan].


Gene families : OG_01_0004462 (OrthoFinder) Phylogenetic Tree(s): OG0004462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0003s0165.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021719.6 tig00021719_g23151.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder
Cre07.g325746 30775115, RPL38 Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder
Cz01g08210.t1 No alias Ribosomal protein L38e [Interproscan]. 0.07 OrthoFinder
Dusal.0190s00012.1 33189449 Ribosomal protein L38e [Interproscan]. 0.03 OrthoFinder
OT_11G02560.1 No alias Ribosomal protein L38e [Interproscan]. 0.04 OrthoFinder
PTI_05G02170.1 No alias Ribosomal protein L38e [Interproscan]. 0.06 OrthoFinder
TP02G00250.1 No alias Ribosomal protein L38e [Interproscan]. 0.04 OrthoFinder
XM_002508915.1 MICPUN_63254, 63254 Ribosomal protein L38e [Interproscan]. 0.07 OrthoFinder
XM_003061755.1 MicpuC2_51368, 51368 Ribosomal protein L38e [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000190.1_cds_GFH08863.1_3340 HaLaN_03898, GFH08863 Ribosomal protein L38e [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59048.1_7123 PRW59048 60S ribosomal L38 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
CC GO:0034998 oligosaccharyltransferase I complex IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
InterPro domains Description Start Stop
IPR002675 Ribosomal_L38e 2 69
No external refs found!