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  5. Vocar.0003s0138.1

Vocar.0003s0138.1 (32889055)


Aliases : 32889055

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0001478 (OrthoFinder) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0003s0138.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cre07.g313850 30774883 Dynein assembly factor with WDR repeat domains 1... 0.09 OrthoFinder
Cre13.g562800 30784303 No description available 0.09 OrthoFinder
Dusal.0471s00005.1 33188520 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003062148.1 MicpuC2_51771, 51771 EF-hand domain; WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000623.1_cds_GFH13534.1_8011 HaLaN_09434, GFH13534 EF-hand domain [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000867.1_cds_GFH15558.1_10035 HaLaN_11803, GFH15558 EF-hand domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000867.1_cds_GFH15559.1_10036 HaLaN_11805, GFH15559 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005874 microtubule IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019799 tubulin N-acetyltransferase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0071929 alpha-tubulin acetylation IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:0099081 supramolecular polymer IEP Enrichment
CC GO:0099512 supramolecular fiber IEP Enrichment
CC GO:0099513 polymeric cytoskeletal fiber IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 251 285
IPR001680 WD40_repeat 52 85
No external refs found!