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  5. Vocar.0002s0598.1

Vocar.0002s0598.1 (32891063)


Aliases : 32891063

Description : Histone H2A/H2B/H3 [Interproscan].


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0002s0598.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264650 30779911, HTR27 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g265250 30779294 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre17.g709050 30782593, HTR3 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cz13g04210.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Cz19g02230.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
Dusal.0002s00025.1 33187952 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0073s00028.1 33194595 Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
Dusal.0093s00033.1 33185318 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.0152s00002.1 33186216 Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
Dusal.0806s00005.1 33190346 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.1067s00005.1 33188990 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.1079s00002.1 33193518 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
EOD27405 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
OT_11G02230.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
PTI_01G11360.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Sro348_g123190.1 Contig2346.g19285 Histone H3 0.01 OrthoFinder
TP07G03200.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
TP07G03270.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
XM_003061662.1 MicpuC2_48264, 48264 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57380.1_9028 PRW57380 Histone H3 0.04 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32917.1_3775 PRW32917 Histone H3 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492817.1_2553 KAA8492817 Histone H3 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0004857 enzyme inhibitor activity IEP Enrichment
MF GO:0004866 endopeptidase inhibitor activity IEP Enrichment
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
MF GO:0030414 peptidase inhibitor activity IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
MF GO:0061134 peptidase regulator activity IEP Enrichment
MF GO:0061135 endopeptidase regulator activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 131
No external refs found!