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  5. Vocar.0002s0546.1

Vocar.0002s0546.1 (32890894)


Aliases : 32890894

Description : Ribosomal protein S15 [Interproscan].


Gene families : OG_01_0001372 (OrthoFinder) Phylogenetic Tree(s): OG0001372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0002s0546.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001206.21 tig00001206_g7508.t1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Cpa|evm.model.tig00021127.67 tig00021127_g18744.t1 No description available 0.01 OrthoFinder
Cre06.g264300 30780052, PRPS15 Protein biosynthesis.organelle translation... 0.15 OrthoFinder
Cz15g13260.t1 No alias Ribosomal protein S15 [Interproscan]. 0.07 OrthoFinder
EOD28201 No alias Ribosomal protein S15 [Interproscan]. 0.02 OrthoFinder
OT_05G02950.1 No alias Ribosomal protein S15 [Interproscan]. 0.09 OrthoFinder
Sro48_g028080.1 Contig1255.g11703 Protein S15 0.02 OrthoFinder
TP03G04130.1 No alias Ribosomal protein S15 [Interproscan]. 0.02 OrthoFinder
XM_002500566.1 MICPUN_79717, 79717 Ribosomal protein S15 [Interproscan]. 0.09 OrthoFinder
XM_003057207.1 MicpuC2_32255, 32255 Ribosomal protein S15 [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20815.1_5044 PRW20815 30S ribosomal S15 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000589 Ribosomal_S15 46 122
No external refs found!