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  5. Vocar.0002s0401.1

Vocar.0002s0401.1 (32891256)


Aliases : 32891256

Description : SANT/Myb domain [Interproscan].


Gene families : OG_01_0000201 (OrthoFinder) Phylogenetic Tree(s): OG0000201_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0002s0401.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cre06.g275350 30778881 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder
Cre12.g514400 30792521 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder
Cz02g14080.t1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
PTI_10G02790.1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Sro880_g215080.1 Contig3977.g30546 Protein REVEILLE 7 0.02 OrthoFinder
XM_002501192.1 MICPUN_105391, 105391 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 56 99
No external refs found!