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  5. Vocar.0002s0365.1

Vocar.0002s0365.1 (32891062)


Aliases : 32891062

Description : CENP-T/Histone H4, histone fold [Interproscan].


Gene families : OG_01_0000049 (OrthoFinder) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0002s0365.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264600 30778471, HFO14 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g265050 30779745, HFO13 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g265200 30779324 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g265450 30780160, HFO12 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g266600 30779351 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g268000 30778752, HFO10 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g268400 30778503, HFO9 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g271300 30778524, HFO8 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g274150 30779076 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g274300 30779970, HFO29 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g274900 30779353 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g275700 30779739, HFO4 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g276650 30778456 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre06.g276800 30779091, HFO24 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre12.g504600 30793030, HFO15 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre12.g504850 30792412, HFO16 Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder
Cre12.g505450 30792334, HFO17 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre12.g506350 30793405, HFO18 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre12.g506450 30793367, HFO35 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre17.g708650 30782678, HFO20 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cre17.g709100 30782193 Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder
Cz05g04160.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
Cz07g08160.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
Cz08g27150.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Cz13g04220.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
Cz18g11090.t1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
PTI_06G03840.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
PTI_06G03920.1 No alias CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
Sro1535_g280560.1 Contig3021.g24093 Histone H4 0.04 OrthoFinder
Sro1642_g288070.1 Contig4503.g33765 Histone H4 0.04 OrthoFinder
Sro2314_g322920.1 Contig3467.g26906 Histone H4 0.05 OrthoFinder
Vocar.0002s0360.1 32890737 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
Vocar.0006s0182.1 32894065 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
XM_002502186.1 MICPUN_81444, 81444 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
XM_003059474.1 MicpuC2_17893, 17893 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder
XM_003061468.1 MicpuC2_20662, 20662 Histone H4 0.02 OrthoFinder
XM_003061710.1 MicpuC2_51276, 51276 CENP-T/Histone H4, histone fold [Interproscan]. 0.02 OrthoFinder
XM_003062992.1 MicpuC2_52643, 52643 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 34 96
No external refs found!