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  5. Vocar.0002s0312.1

Vocar.0002s0312.1 (32890795)


Aliases : 32890795

Description : Mitochondrial degradasome RNA helicase subunit, C-terminal domain; Suv3, C-terminal domain 1 [Interproscan].


Gene families : OG_01_0002222 (OrthoFinder) Phylogenetic Tree(s): OG0002222_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0002s0312.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Cz12g02020.t1 No alias Helicase, C-terminal; Suv3, C-terminal domain 1 [Interproscan]. 0.02 OrthoFinder
Sro345_g122490.1 Contig2266.g18808 RNA helicase SUPV3L1, mitochondrial 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0042274 ribosomal small subunit biogenesis IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR022192 SUV3_C 934 980
IPR041082 Suv3_C_1 861 903
No external refs found!