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  5. Vocar.0002s0222.1

Vocar.0002s0222.1 (32891260)


Aliases : 32891260

Description : Protein LOW PSII ACCUMULATION 1-like [Interproscan].


Gene families : OG_01_0001058 (OrthoFinder) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0002s0222.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre06.g266900 30780099 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.08 OrthoFinder
EOD37263 No alias Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
Sro73_g040520.1 Contig3929.g30153 Protein of unknown function (DUF3493) 0.03 OrthoFinder
Transcript_contig_1368 1368 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
Transcript_contig_55195 55195 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
XM_002506235.1 MICPUN_109524, 109524 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01005675.1_cds_GFH31494.1_25971 HaLaN_30554, GFH31494 Acetylglucosaminyltransferase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR021883 LPA1-like 64 139
No external refs found!