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Aliases : 32891009
Description : Lycopene cyclase protein [Interproscan].
Gene families : OG_01_0001374 (OrthoFinder) Phylogenetic Tree(s): OG0001374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0002s0179.1 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g267600 | 30779398, LEC1 | Secondary metabolism.terpenoids.terpenoid... | 0.06 | OrthoFinder | |
| Cre08.g358538 | 30773892 | Secondary metabolism.terpenoids.terpenoid... | 0.06 | OrthoFinder | |
| Cz09g18310.t1 | No alias | Lycopene cyclase protein [Interproscan]. | 0.04 | OrthoFinder | |
| Dusal.0649s00010.1 | 33200314 | Lycopene cyclase protein [Interproscan]. | 0.03 | OrthoFinder | |
| EOD39523 | No alias | Lycopene cyclase protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_14G00760.1 | No alias | Lycopene cyclase protein; Chlorophyll A-B binding... | 0.04 | OrthoFinder | |
| Sro1061_g236780.1 | Contig3773.g28961 | Capsanthin/capsorubin synthase, chromoplastic | 0.04 | OrthoFinder | |
| Sro1391_g268770.1 | Contig735.g8426 | Capsanthin/capsorubin synthase, chromoplastic | 0.03 | OrthoFinder | |
| Sro1810_g299160.1 | Contig2202.g18323 | Capsanthin/capsorubin synthase, chromoplastic | 0.01 | OrthoFinder | |
| Transcript_contig_3036 | 3036 | Lycopene cyclase protein [Interproscan]. | 0.04 | OrthoFinder | |
| lcl|BLLF01000275.1_cds_GFH09920.1_4397 | HaLaN_05151, GFH09920 | Lycopene beta cyclase | 0.03 | OrthoFinder | |
| lcl|BLLF01003907.1_cds_GFH28508.1_22985 | HaLaN_27012, GFH28508 | Chloroplast lycopene epsilon-cyclase | 0.01 | OrthoFinder | |
| lcl|LHPG02000009.1_cds_PRW56341.1_10296 | PRW56341 | Lycopene epsilon cyclase | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004312 | fatty acid synthase activity | IEP | Enrichment |
| MF | GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | IEP | Enrichment |
| MF | GO:0004366 | glycerol-3-phosphate O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Enrichment |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Enrichment |
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0008483 | transaminase activity | IEP | Enrichment |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Enrichment |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
| BP | GO:0015977 | carbon fixation | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Enrichment |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Enrichment |
| MF | GO:0019842 | vitamin binding | IEP | Enrichment |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Enrichment |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | Enrichment |
| BP | GO:0045454 | cell redox homeostasis | IEP | Enrichment |
| BP | GO:0046164 | alcohol catabolic process | IEP | Enrichment |
| BP | GO:0046174 | polyol catabolic process | IEP | Enrichment |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | Enrichment |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | Enrichment |
| MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:0070279 | vitamin B6 binding | IEP | Enrichment |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | Enrichment |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |