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  5. Cpa|evm.model.tig00000241.57

Cpa|evm.model.tig00000241.57 (tig00000241_g20915.t1)


Aliases : tig00000241_g20915.t1

Description : Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond(50.3.5 : 211.9) & Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000582 (OrthoFinder) Phylogenetic Tree(s): OG0000582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000241.57
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cre14.g620350 30776207 Probable bifunctional riboflavin biosynthesis protein... 0.02 OrthoFinder
Sro1130_g244470.1 Contig1486.g13577 Riboflavin biosynthesis protein RibBA 0.02 OrthoFinder
SymbC1.scaffold4.582 4.582 GTP cyclohydrolase II; ABC transporter-like; MacB-like... 0.03 OrthoFinder
Transcript_contig_58499 58499 GTP cyclohydrolase II [Interproscan]. 0.01 OrthoFinder
XM_002500807.1 MICPUN_56752, 56752 GTP cyclohydrolase II [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000866.1_cds_GFH15550.1_10027 HaLaN_11794, GFH15550 GTP_cyclohydro2 domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006597 spermine biosynthetic process IEP Enrichment
BP GO:0008215 spermine metabolic process IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 22 109
IPR032677 GTP_cyclohydro_II 196 360
No external refs found!