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  5. Vocar.0001s1683.1

Vocar.0001s1683.1 (32884888)


Aliases : 32884888

Description : Ribosomal protein L19/L19e [Interproscan].


Gene families : OG_01_0002658 (OrthoFinder) Phylogenetic Tree(s): OG0002658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1683.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021181.1 tig00021181_g19305.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder
Dusal.0530s00005.1 33203474 Ribosomal protein L19/L19e [Interproscan]. 0.07 OrthoFinder
EOD07611 No alias Ribosomal protein L19/L19e [Interproscan]. 0.01 OrthoFinder
OT_02G02430.1 No alias Ribosomal protein L19/L19e [Interproscan]. 0.07 OrthoFinder
PTI_21G02720.1 No alias Ribosomal protein L19/L19e; Chlorophyll A-B binding... 0.1 OrthoFinder
Sro734_g194640.1 Contig3769.g28942 60S ribosomal protein L19 0.14 OrthoFinder
TP02G08540.1 No alias Ribosomal protein L19/L19e [Interproscan]. 0.03 OrthoFinder
Transcript_contig_90584 90584 Ribosomal protein L19/L19e [Interproscan]. 0.02 OrthoFinder
XM_002507605.1 MICPUN_112659, 112659 60S ribosomal protein L19 (RPL19) 0.07 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32846.1_3749 PRW32846 60S ribosomal L19-2 isoform A 0.04 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32847.1_3748 PRW32847 60S ribosomal L19-2 isoform B 0.04 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8490961.1_6164 KAA8490961 60S ribosomal protein L19-2 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0004857 enzyme inhibitor activity IEP Enrichment
MF GO:0004866 endopeptidase inhibitor activity IEP Enrichment
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0030414 peptidase inhibitor activity IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
MF GO:0061134 peptidase regulator activity IEP Enrichment
MF GO:0061135 endopeptidase regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 146
No external refs found!