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  5. Vocar.0001s1642.1

Vocar.0001s1642.1 (32885308)


Aliases : 32885308

Description : Ubiquitin-conjugating enzyme E2 [Interproscan].


Gene families : OG_01_0001476 (OrthoFinder) Phylogenetic Tree(s): OG0001476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1642.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000737.3 tig00000737_g3782.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Dusal.0477s00007.1 33196083 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
CC GO:0005849 mRNA cleavage factor complex IEP Enrichment
BP GO:0006378 mRNA polyadenylation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!