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  5. Vocar.0001s1518.1

Vocar.0001s1518.1 (32885649)


Aliases : 32885649

Description : AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000298 (OrthoFinder) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1518.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cz07g22230.t1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
Dusal.1087s00001.1 33187281 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
OT_12G00930.1 No alias AMP-dependent synthetase/ligase [Interproscan]. 0.02 OrthoFinder
Transcript_contig_53732 53732 AMP-dependent synthetase/ligase [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56267 56267 AMP-dependent synthetase/ligase [Interproscan]. 0.02 OrthoFinder
XM_002503583.1 MICPUN_97670, 97670 AMP-dependent synthetase/ligase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000766.1_cds_GFH14784.1_9261 HaLaN_10898, GFH14784 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60727.1_4391 PRW60727 Long chain acyl-synthetase 4 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 77 525
No external refs found!