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  5. Vocar.0001s1502.1

Vocar.0001s1502.1 (32885788)


Aliases : 32885788

Description : Target SNARE coiled-coil homology domain; Syntaxin 6, N-terminal [Interproscan].


Gene families : OG_01_0001667 (OrthoFinder) Phylogenetic Tree(s): OG0001667_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1502.1
Cluster HCCA: Cluster_34


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0048193 Golgi vesicle transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030686 90S preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 171 221
IPR015260 Syntaxin-6_N 5 98
No external refs found!