Vocar.0001s1458.1 (32885943)

Aliases : 32885943

Description : Ribosomal protein L29/L35 [Interproscan].

Gene families : OG_01_0003855 (OrthoFinder) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0001s1458.1
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000241.79	tig00000241_g20941.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder
Cre14.g617900	30776584, RPL35	Protein biosynthesis.cytosolic ribosome.large subunit...	0.19	OrthoFinder
Cz12g12300.t1	No alias	Ribosomal protein L29/L35 [Interproscan].	0.11	OrthoFinder
Dusal.0936s00001.1	33189602	Ribosomal protein L29/L35 [Interproscan].	0.04	OrthoFinder
EOD14796	No alias	Ribosomal protein L29/L35 [Interproscan].	0.08	OrthoFinder
OT_05G01490.1	No alias	Ribosomal protein L29/L35 [Interproscan].	0.05	OrthoFinder
PTI_06G01310.1	No alias	Ribosomal protein L29/L35 [Interproscan].	0.08	OrthoFinder
Sro1394_g268940.1	Contig598.g7460	60S ribosomal protein L35	0.11	OrthoFinder
SymbC1.scaffold356.4	356.4	Ribosomal protein L29/L35 [Interproscan].	0.04	OrthoFinder
TP12G02050.1	No alias	Ribosomal protein L29/L35 [Interproscan].	0.12	OrthoFinder
XM_002507650.1	MICPUN_107597, 107597	Ribosomal protein L29/L35 [Interproscan].	0.09	OrthoFinder
XM_003056132.1	MicpuC2_49485, 49485	60S ribosomal protein L35 (RPL35)	0.07	OrthoFinder
lcl\|LHPG02000021.1_cds_PRW20803.1_5002	PRW20803	60S ribosomal L35-like	0.06	OrthoFinder
lcl\|VRMN01000009.1_cds_KAA8492667.1_9360	KAA8492667	60S ribosomal protein L35	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Enrichment
CC	GO:0005739	mitochondrion	IEP	Enrichment
CC	GO:0005743	mitochondrial inner membrane	IEP	Enrichment
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Enrichment
CC	GO:0005783	endoplasmic reticulum	IEP	Enrichment
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Enrichment
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Enrichment
BP	GO:0006487	protein N-linked glycosylation	IEP	Enrichment
BP	GO:0007021	tubulin complex assembly	IEP	Enrichment
BP	GO:0007023	post-chaperonin tubulin folding pathway	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Enrichment
BP	GO:0009060	aerobic respiration	IEP	Enrichment
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
BP	GO:0019646	aerobic electron transport chain	IEP	Enrichment
CC	GO:0019866	organelle inner membrane	IEP	Enrichment
BP	GO:0022900	electron transport chain	IEP	Enrichment
BP	GO:0022904	respiratory electron transport chain	IEP	Enrichment
CC	GO:0032993	protein-DNA complex	IEP	Enrichment
CC	GO:0034998	oligosaccharyltransferase I complex	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
CC	GO:0044815	DNA packaging complex	IEP	Enrichment
CC	GO:0045275	respiratory chain complex III	IEP	Enrichment
BP	GO:0045333	cellular respiration	IEP	Enrichment
MF	GO:0048487	beta-tubulin binding	IEP	Enrichment
CC	GO:0070069	cytochrome complex	IEP	Enrichment
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Enrichment
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Enrichment
CC	GO:0098803	respiratory chain complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001854	Ribosomal_L29/L35	8	63

External Links

No external refs found!

Vocar.0001s1458.1 (32885943)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation