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  5. Vocar.0001s1376.1

Vocar.0001s1376.1 (32884584)


Aliases : 32884584

Description : Zinc finger, CCCH-type [Interproscan].


Gene families : OG_01_0009541 (OrthoFinder) Phylogenetic Tree(s): OG0009541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1376.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Dusal.0205s00002.1 33197312 Zinc finger, CCCH-type [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
BP GO:0010824 regulation of centrosome duplication IEP Enrichment
BP GO:0010826 negative regulation of centrosome duplication IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
CC GO:0036038 MKS complex IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046605 regulation of centrosome cycle IEP Enrichment
BP GO:0046606 negative regulation of centrosome cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051494 negative regulation of cytoskeleton organization IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 218 239
IPR000571 Znf_CCCH 178 199
No external refs found!