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  5. Vocar.0001s1319.1

Vocar.0001s1319.1 (32884622)


Aliases : 32884622

Description : ATPase, vacuolar ER assembly factor, Vma12 [Interproscan].


Gene families : OG_01_0007763 (OrthoFinder) Phylogenetic Tree(s): OG0007763_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1319.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
EOD41907 No alias ATPase, vacuolar ER assembly factor, Vma12 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Enrichment
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0033176 proton-transporting V-type ATPase complex IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR021013 ATPase_Vma12 71 155
No external refs found!