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  5. Vocar.0001s1300.1

Vocar.0001s1300.1 (32885813)


Aliases : 32885813

Description : Proteasomal ATPase OB C-terminal domain; ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0002509 (OrthoFinder) Phylogenetic Tree(s): OG0002509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1300.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001187.20 tig00001187_g7469.t1 26S proteasome regulatory subunit 6A homolog OS=Oryza... 0.03 OrthoFinder
Cre10.g439150 30790715, RPT5 Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder
Dusal.0100s00007.1 33202449 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
EOD04234 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.03 OrthoFinder
OT_06G04090.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.03 OrthoFinder
PTI_01G00490.1 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.08 OrthoFinder
Sro1266_g257580.1 Contig2620.g21277 26S protease regulatory subunit 6A 0.02 OrthoFinder
Sro536_g162160.1 Contig299.g3946 26S protease regulatory subunit 6A 0.1 OrthoFinder
TP06G02610.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.07 OrthoFinder
XM_002507809.1 MICPUN_107027, 107027 AAA ATPase, AAA+ lid domain; Proteasomal ATPase OB... 0.08 OrthoFinder
XM_003062143.1 MicpuC2_35637, 35637 Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.03 OrthoFinder
lcl|BLLF01001710.1_cds_GFH20853.1_15330 HaLaN_18047, GFH20853 AAA domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 78 154
IPR041569 AAA_lid_3 367 411
IPR003959 ATPase_AAA_core 212 344
No external refs found!