Vocar.0001s1263.1 (32884572)


Aliases : 32884572

Description : Nop domain; NOP5, N-terminal [Interproscan].


Gene families : OG_01_0003448 (OrthoFinder) Phylogenetic Tree(s): OG0003448_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1263.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cre10.g441400 30790401, NOP58 RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder
EOD18645 No alias Nop domain; NOP5, N-terminal [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000353.1_cds_GFH10856.1_5333 HaLaN_06252, GFH10856 MAR-binding protein 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56410.1_9835 PRW56410 Putative nucleolar 5-2 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495669.1_1667 KAA8495669 Nucleolar protein 58 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR012974 NOP5_N 2 65
IPR002687 Nop_dom 167 395
No external refs found!