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  5. Vocar.0001s1196.1

Vocar.0001s1196.1 (32884710)


Aliases : 32884710

Description : Leucine rich repeat 4 [Interproscan].


Gene families : OG_01_0004018 (OrthoFinder) Phylogenetic Tree(s): OG0004018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1196.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020912.52 tig00020912_g15824.t1 Dynein light chain 1, axonemal OS=Chlamydomonas reinhardtii 0.02 OrthoFinder
Cre02.g092850 30785179, DLC1 Dynein light chain 1, axonemal OS=Chlamydomonas reinhardtii 0.09 OrthoFinder
Cz06g25120.t1 No alias Leucine-rich repeat [Interproscan]. 0.02 OrthoFinder
EOD14011 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
EOD33002 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD40151 No alias Flagellar dynein light chain 1 [Ensembl]. 0.03 OrthoFinder
TP08G00390.1 No alias Leucine rich repeat 4 [Interproscan]. 0.01 OrthoFinder
XM_002500440.1 MICPUN_80279, 80279 Outer arm dynein light chain 1 (LC1) 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0010970 transport along microtubule IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042073 intraciliary transport IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0099111 microtubule-based transport IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 50 89
IPR025875 Leu-rich_rpt_4 95 133
No external refs found!