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  5. Vocar.0001s1146.1

Vocar.0001s1146.1 (32886161)


Aliases : 32886161

Description : Ribosomal protein S6 [Interproscan].


Gene families : OG_01_0004555 (OrthoFinder) Phylogenetic Tree(s): OG0004555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1146.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000101.5 tig00000101_g4443.t1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005758 mitochondrial intermembrane space IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016530 metallochaperone activity IEP Enrichment
MF GO:0016531 copper chaperone activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0031970 organelle envelope lumen IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 4 95
No external refs found!