Vocar.0001s1013.1 (32886064)


Aliases : 32886064

Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0003257 (OrthoFinder) Phylogenetic Tree(s): OG0003257_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s1013.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001371.8 tig00001371_g8424.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder
Cre01.g026550 30789046, CCT7 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 OrthoFinder
Cz09g09290.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.08 OrthoFinder
EOD40691 No alias Chaperonin complex component, TCP-1 eta subunit [Ensembl]. 0.05 OrthoFinder
OT_15G00280.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
PTI_12G01110.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
Sro626_g177820.1 Contig1809.g15957 Thermosome subunit beta (Fragment) 0.06 OrthoFinder
TP06G02300.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56876 56876 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
XM_002506651.1 MICPUN_106612, 106612 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
XM_003058413.1 MicpuC2_44294, 44294 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01003283.1_cds_GFH26903.1_21380 HaLaN_25134, GFH26903 T-complex protein 1 subunit eta 0.05 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494336.1_4200 KAA8494336 T-complex protein 1 subunit eta 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0017128 phospholipid scramblase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140303 intramembrane lipid transporter activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 39 530
No external refs found!