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  5. Vocar.0001s0983.1

Vocar.0001s0983.1 (32884492)


Aliases : 32884492

Description : Cysteine-rich Golgi apparatus protein 1 repeat [Interproscan].


Gene families : OG_01_0001042 (OrthoFinder) Phylogenetic Tree(s): OG0001042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0983.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre01.g005050 30788576 No description available 0.04 OrthoFinder
Cre12.g503500 30793090 No description available 0.03 OrthoFinder
Cre12.g512000 30793519 No description available 0.04 OrthoFinder
Cz02g12120.t1 No alias Cysteine-rich Golgi apparatus protein 1 repeat [Interproscan]. 0.02 OrthoFinder
UNPLg00172.t1 No alias Cysteine-rich Golgi apparatus protein 1 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000029.1_cds_GFH06252.1_729 HaLaN_00852, GFH06252 Cysteine-rich Golgi apparatus protein 1 repeat [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01003391.1_cds_GFH27209.1_21686 HaLaN_25497, GFH27209 Cysteine-rich Golgi apparatus protein 1 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003974.1_cds_GFH28645.1_23122 HaLaN_27172, GFH28645 Cysteine-rich Golgi apparatus protein 1 repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP Enrichment
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Enrichment
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019310 inositol catabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0032422 purine-rich negative regulatory element binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0050113 inositol oxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR001893 Cys-rich_GLG1_repeat 577 626
IPR001893 Cys-rich_GLG1_repeat 763 818
IPR001893 Cys-rich_GLG1_repeat 644 696
IPR001893 Cys-rich_GLG1_repeat 290 342
IPR001893 Cys-rich_GLG1_repeat 820 875
IPR001893 Cys-rich_GLG1_repeat 349 401
IPR001893 Cys-rich_GLG1_repeat 882 949
IPR001893 Cys-rich_GLG1_repeat 703 758
IPR001893 Cys-rich_GLG1_repeat 445 499
No external refs found!