Vocar.0001s0965.1 (32885025)


Aliases : 32885025

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0006798 (OrthoFinder) Phylogenetic Tree(s): OG0006798_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0965.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020710.81 tig00020710_g13335.t2 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021122.11 tig00021122_g18442.t1 No description available 0.04 OrthoFinder
Cre01.g032150 30788368, FAP187 No description available 0.14 OrthoFinder
Cz06g23070.t1 No alias WD40 repeat [Interproscan]. 0.05 OrthoFinder
XM_002503148.1 MICPUN_100958, 100958 WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000021.1_cds_GFH06087.1_564 HaLaN_00659, GFH06087 WD_REPEATS_REGION domain-containing protein 0.05 OrthoFinder
lcl|BLLF01000038.1_cds_GFH06432.1_909 HaLaN_01062, GFH06432 WD40 repeat [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 213 247
IPR001680 WD40_repeat 408 436
IPR001680 WD40_repeat 455 486
IPR001680 WD40_repeat 49 84
No external refs found!