Vocar.0001s0928.1 (32884830)

Aliases : 32884830

Description : ABC transporter-like; ABC-2 type transporter [Interproscan].

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Vocar.0001s0928.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Sro604_g174070.1 Contig2463.g20161 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
Transcript_contig_56456 56456 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_89748 89748 ABC transporter-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1143 1352
IPR003439 ABC_transporter-like_ATP-bd 824 982
No external refs found!