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  5. Vocar.0001s0912.1

Vocar.0001s0912.1 (32885424)


Aliases : 32885424

Description : Ribosomal protein L34 [Interproscan].


Gene families : OG_01_0004351 (OrthoFinder) Phylogenetic Tree(s): OG0004351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0912.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cre01.g030050 30788509, PRPL34 Protein biosynthesis.organelle translation... 0.17 OrthoFinder
Cz06g13050.t1 No alias Ribosomal protein L34 [Interproscan]. 0.04 OrthoFinder
OT_05G03900.1 No alias Ribosomal protein L34 [Interproscan]. 0.11 OrthoFinder
TPCG02020.1 No alias Ribosomal protein L34 [Interproscan]. 0.03 OrthoFinder
TPCG02990.1 No alias Ribosomal protein L34 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56760 56760 Ribosomal protein L34 [Interproscan]. 0.02 OrthoFinder
XM_002502551.1 MICPUN_108309, 108309 Ribosomal protein L34 [Interproscan]. 0.1 OrthoFinder
lcl|BLLF01002151.1_cds_GFH22905.1_17382 HaLaN_20436, GFH22905 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01007548.1_cds_GFH32999.1_27476 HaLaN_32308, GFH32999 Ribosomal protein L34 [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60083.1_6540 PRW60083 50S ribosomal L34 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000271 Ribosomal_L34 82 119
No external refs found!