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Aliases : 32884654
Description : High mobility group box domain; Domain of unknown function DUF1747; SSRP1 domain; FACT complex subunit POB3-like, N-terminal PH domain [Interproscan].
Gene families : OG_01_0001888 (OrthoFinder) Phylogenetic Tree(s): OG0001888_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0001s0906.1 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre01.g029450 | 30788422 | Chromatin organisation.histone chaperone activities.FACT... | 0.05 | OrthoFinder | |
| Dusal.0414s00001.1 | 33185365 | Domain of unknown function DUF1747; SSRP1 domain; High... | 0.02 | OrthoFinder | |
| OT_14G01280.1 | No alias | SSRP1 domain; High mobility group box domain; Domain of... | 0.03 | OrthoFinder | |
| PTI_05G03970.1 | No alias | High mobility group box domain; FACT complex subunit... | 0.01 | OrthoFinder | |
| Sro1996_g310030.1 | Contig3556.g27464 | FACT complex subunit SSRP1 | 0.03 | OrthoFinder | |
| SymbC1.scaffold163.2 | 163.2 | EF-hand domain [Interproscan]. | 0.01 | OrthoFinder | |
| TP05G05870.1 | No alias | FACT complex subunit POB3-like, N-terminal PH domain;... | 0.01 | OrthoFinder | |
| Transcript_contig_89236 | 89236 | SSRP1 domain; FACT complex subunit POB3-like, N-terminal... | 0.06 | OrthoFinder | |
| XM_002505740.1 | MICPUN_63692, 63692 | Histone chaperone | 0.02 | OrthoFinder | |
| XM_003063780.1 | MicpuC2_22975, 22975 | Histone chaperone | 0.02 | OrthoFinder | |
| lcl|BLLF01009144.1_cds_GFH33632.1_28109 | HaLaN_33030, GFH33632 | Hypothetical protein | 0.01 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59998.1_6358 | PRW59998 | FACT complex subunit SSRP1 | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003856 | 3-dehydroquinate synthase activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | Enrichment |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Enrichment |
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Enrichment |
| MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Enrichment |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006098 | pentose-phosphate shunt | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006334 | nucleosome assembly | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006470 | protein dephosphorylation | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006606 | protein import into nucleus | IEP | Enrichment |
| BP | GO:0006739 | NADP metabolic process | IEP | Enrichment |
| BP | GO:0006740 | NADPH regeneration | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Enrichment |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
| BP | GO:0017038 | protein import | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| BP | GO:0034504 | protein localization to nucleus | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051170 | import into nucleus | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| CC | GO:0090730 | Las1 complex | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Enrichment |
| MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| CC | GO:1902555 | endoribonuclease complex | IEP | Enrichment |
| CC | GO:1902911 | protein kinase complex | IEP | Enrichment |
| CC | GO:1905354 | exoribonuclease complex | IEP | Enrichment |
| No external refs found! |