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Aliases : 32885389
Description : Histone H2A/H2B/H3 [Interproscan].
Gene families : OG_01_0000102 (OrthoFinder) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0001s0881.1 | |
| Cluster | HCCA: Cluster_37 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g264900 | 30779615, HTB13 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cre06.g265400 | 30779197 | Chromatin organisation.histones.H2B-type histone | 0.02 | OrthoFinder | |
| Cre06.g268100 | 30778559, HTB10 | Chromatin organisation.histones.H2B-type histone | 0.02 | OrthoFinder | |
| Cre06.g268250 | 30778807, HTB9 | Chromatin organisation.histones.H2B-type histone | 0.02 | OrthoFinder | |
| Cre06.g271376 | 30780144 | Chromatin organisation.histones.H2B-type histone | 0.02 | OrthoFinder | |
| Cre06.g273850 | 30778673, HTB7 | Chromatin organisation.histones.H2B-type histone | 0.03 | OrthoFinder | |
| Cre06.g274250 | 30779155 | Chromatin organisation.histones.H2B-type histone | 0.03 | OrthoFinder | |
| Cre06.g274750 | 30779303 | Chromatin organisation.histones.H2B-type histone | 0.03 | OrthoFinder | |
| Cre06.g275800 | 30778604 | Chromatin organisation.histones.H2B-type histone | 0.03 | OrthoFinder | |
| Cre06.g276550 | 30778890, HTB23 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cre06.g276900 | 30779728, HTB24 | Chromatin organisation.histones.H2B-type histone | 0.03 | OrthoFinder | |
| Cre12.g504550 | 30792324 | Chromatin organisation.histones.H2B-type histone | 0.03 | OrthoFinder | |
| Cre12.g504700 | 30793271 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cre12.g506200 | 30793175 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cre13.g570050 | 30784307, HTB2 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cre13.g590750 | 30783880, HTB37 | Chromatin organisation.histones.H2B-type histone | 0.02 | OrthoFinder | |
| Cre13.g591200 | 30784473, HTB38 | Chromatin organisation.histones.H2B-type histone | 0.02 | OrthoFinder | |
| Cre17.g709150 | 30782749 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cre17.g710450 | 30782433 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cre17.g711750 | 30781954 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cre17.g713450 | 30782606 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cre17.g714050 | 30782614, HTB21 | Chromatin organisation.histones.H2B-type histone | 0.04 | OrthoFinder | |
| Cz02g02060.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.04 | OrthoFinder | |
| Cz05g04190.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| Cz07g08190.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| Cz08g27120.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| Cz18g11110.t1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| EOD16252 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.04 | OrthoFinder | |
| EOD17479 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.04 | OrthoFinder | |
| EOD18484 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.04 | OrthoFinder | |
| EOD26824 | No alias | Putative histone H2B [Ensembl]. | 0.04 | OrthoFinder | |
| EOD34128 | No alias | Hypothetical protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD41189 | No alias | Putative histone H2B [Ensembl]. | 0.04 | OrthoFinder | |
| OT_08G01920.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.02 | OrthoFinder | |
| OT_12G00920.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| PTI_06G02120.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.04 | OrthoFinder | |
| PTI_06G04930.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.03 | OrthoFinder | |
| Sro1535_g280540.1 | Contig3021.g24091 | Histone H2B | 0.03 | OrthoFinder | |
| Sro228_g092710.1 | Contig1235.g11585 | Histone H2B | 0.02 | OrthoFinder | |
| Sro470_g149440.1 | Contig850.g9338 | Histone H2B | 0.02 | OrthoFinder | |
| TP05G07690.1 | No alias | Histone H2A/H2B/H3 [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003055466.1 | MicpuC2_13212, 13212 | Histone H2B | 0.04 | OrthoFinder | |
| XM_003058473.1 | MicpuC2_58125, 58125 | Histone H2A/H2B/H3 [Interproscan]. | 0.06 | OrthoFinder | |
| XM_003061989.1 | MicpuC2_35705, 35705 | Histone H2A/H2B/H3 [Interproscan]. | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEA | Interproscan |
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
| MF | GO:0003747 | translation release factor activity | IEP | Enrichment |
| BP | GO:0006415 | translational termination | IEP | Enrichment |
| BP | GO:0006417 | regulation of translation | IEP | Enrichment |
| BP | GO:0006448 | regulation of translational elongation | IEP | Enrichment |
| BP | GO:0006449 | regulation of translational termination | IEP | Enrichment |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
| MF | GO:0008079 | translation termination factor activity | IEP | Enrichment |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
| CC | GO:0009349 | riboflavin synthase complex | IEP | Enrichment |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Enrichment |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Enrichment |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| BP | GO:0022411 | cellular component disassembly | IEP | Enrichment |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0032270 | positive regulation of cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
| MF | GO:0043022 | ribosome binding | IEP | Enrichment |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
| MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
| BP | GO:0045727 | positive regulation of translation | IEP | Enrichment |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | Enrichment |
| BP | GO:0045905 | positive regulation of translational termination | IEP | Enrichment |
| BP | GO:0048518 | positive regulation of biological process | IEP | Enrichment |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Enrichment |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Enrichment |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007125 | Histone_H2A/H2B/H3 | 10 | 132 |
| No external refs found! |