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  5. Vocar.0001s0806.1

Vocar.0001s0806.1 (32886094)


Aliases : 32886094

Description : RNA recognition motif domain; Polyadenylate-binding protein/Hyperplastic disc protein [Interproscan].


Gene families : OG_01_0000841 (OrthoFinder) Phylogenetic Tree(s): OG0000841_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Vocar.0001s0806.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_79161 79161 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
XM_003055503.1 MicpuC2_46263, 46263 RNA recognition motif domain; Polyadenylate-binding... 0.02 OrthoFinder
lcl|BLLF01000095.1_cds_GFH07450.1_1927 HaLaN_02245, GFH07450 Polyadenylate-binding protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR002004 PABP_HYD 593 659
IPR000504 RRM_dom 114 181
IPR000504 RRM_dom 306 374
IPR000504 RRM_dom 23 95
IPR000504 RRM_dom 203 271
No external refs found!