Vocar.0001s0799.1 (32884988)

Aliases : 32884988

Description : KOW; Ribosomal protein L26/L24, eukaryotic/archaeal [Interproscan].

Gene families : OG_01_0003267 (OrthoFinder) Phylogenetic Tree(s): OG0003267_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0001s0799.1
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000144.60	tig00000144_g9051.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder
Cre01.g040000	30788495, RPL26	Protein biosynthesis.cytosolic ribosome.large subunit...	0.18	OrthoFinder
Cz06g24050.t1	No alias	Ribosomal protein L26/L24, eukaryotic/archaeal [Interproscan].	0.08	OrthoFinder
Dusal.0160s00007.1	33188333	Ribosomal protein L26/L24, eukaryotic/archaeal; KOW...	0.08	OrthoFinder
EOD37550	No alias	Ribosomal protein L26/L24, eukaryotic/archaeal; KOW...	0.03	OrthoFinder
OT_12G00940.1	No alias	Ribosomal protein L26/L24, eukaryotic/archaeal; KOW...	0.11	OrthoFinder
PTI_04G00150.1	No alias	Ribosomal protein L26/L24, eukaryotic/archaeal; KOW...	0.13	OrthoFinder
Sro694_g188520.1	Contig4437.g33305	60S ribosomal protein L26	0.14	OrthoFinder
SymbC1.scaffold27.16	27.16	KOW; Ribosomal protein L26/L24, eukaryotic/archaeal...	0.03	OrthoFinder
TP05G04810.1	No alias	Ribosomal protein L26/L24, eukaryotic/archaeal; KOW...	0.11	OrthoFinder
XM_002503926.1	MICPUN_91267, 91267	KOW; Ribosomal protein L26/L24, eukaryotic/archaeal...	0.1	OrthoFinder
XM_003055465.1	MicpuC2_30848, 30848	Ribosomal protein L26/L24, eukaryotic/archaeal; KOW...	0.09	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW60014.1_6792	PRW60014	60S ribosomal L26-1	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Enrichment
CC	GO:0005840	ribosome	IEP	Enrichment
BP	GO:0006082	organic acid metabolic process	IEP	Enrichment
BP	GO:0006520	cellular amino acid metabolic process	IEP	Enrichment
BP	GO:0006541	glutamine metabolic process	IEP	Enrichment
BP	GO:0006542	glutamine biosynthetic process	IEP	Enrichment
BP	GO:0006897	endocytosis	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Enrichment
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Enrichment
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Enrichment
BP	GO:0016053	organic acid biosynthetic process	IEP	Enrichment
MF	GO:0016211	ammonia ligase activity	IEP	Enrichment
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Enrichment
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Enrichment
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Enrichment
BP	GO:0019752	carboxylic acid metabolic process	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
CC	GO:0043226	organelle	IEP	Enrichment
CC	GO:0043228	non-membrane-bounded organelle	IEP	Enrichment
CC	GO:0043229	intracellular organelle	IEP	Enrichment
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Enrichment
BP	GO:0043436	oxoacid metabolic process	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
BP	GO:0044283	small molecule biosynthetic process	IEP	Enrichment
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
MF	GO:0051287	NAD binding	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Enrichment
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005824	KOW	51	82
IPR005756	Ribosomal_L26/L24P_euk/arc	8	121

External Links

No external refs found!

Vocar.0001s0799.1 (32884988)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation