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  5. Vocar.0001s0798.1

Vocar.0001s0798.1 (32885954)


Aliases : 32885954

Description : tRNase Z endonuclease; Metallo-beta-lactamase [Interproscan].


Gene families : OG_01_0000593 (OrthoFinder) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0798.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021133.10 tig00021133_g18909.t1 RNA processing.ribonuclease activities.RNase Z endoribonuclease 0.02 OrthoFinder
Cre16.g680678 30777267, TRZ2 RNA processing.ribonuclease activities.RNase Z endoribonuclease 0.02 OrthoFinder
Cz06g11030.t1 No alias Metallo-beta-lactamase [Interproscan]. 0.02 OrthoFinder
Dusal.0068s00008.1 33187238 Metallo-beta-lactamase [Interproscan]. 0.01 OrthoFinder
EOD11588 No alias Putative elaC-like protein-2 [Ensembl]. 0.02 OrthoFinder
EOD19128 No alias Putative elaC-like protein-3 [Ensembl]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498403.1_7356 KAA8498403 Methylenetetrahydrofolate reductase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR027794 tRNase_Z_dom 58 110
IPR001279 Metallo-B-lactamas 608 820
No external refs found!