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  5. Vocar.0001s0787.1

Vocar.0001s0787.1 (32885973)


Aliases : 32885973

Description : Anaphase-promoting complex subunit 5 domain [Interproscan].


Gene families : OG_01_0006214 (OrthoFinder) Phylogenetic Tree(s): OG0006214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0787.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000004.1_cds_GFH05640.1_117 HaLaN_00139, GFH05640 ANAPC5 domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
InterPro domains Description Start Stop
IPR026000 Apc5_dom 70 107
No external refs found!