Vocar.0001s0694.1 (32884976)


Aliases : 32884976

Description : Hypothetical protein


Gene families : OG_01_0000840 (OrthoFinder) Phylogenetic Tree(s): OG0000840_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0694.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000692.75 tig00000692_g3273.t1 Small RNA degrading nuclease 5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Sro1151_g246730.1 Contig4710.g35024 Small RNA degrading nuclease 0.01 OrthoFinder
Sro545_g163950.1 Contig1180.g11238 RNA exonuclease 5 0.01 OrthoFinder
TP14G01780.1 No alias Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
CC GO:0005813 centrosome IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0007098 centrosome cycle IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031023 microtubule organizing center organization IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!