1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0001s0515.1

Vocar.0001s0515.1 (32886177)


Aliases : 32886177

Description : Ion transport domain; Cyclic nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0515.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre16.g670754 30777028 Potassium channel SKOR OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz05g15090.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
Cz05g22050.t1 No alias Ion transport domain [Interproscan]. 0.03 OrthoFinder
Cz05g35200.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.03 OrthoFinder
Cz12g12240.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
Vocar.0083s0013.1 32896131 Ion transport domain; Cyclic nucleotide-binding domain... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 417 498
IPR005821 Ion_trans_dom 84 312
No external refs found!