Vocar.0001s0273.1 (32884978)

Aliases : 32884978

Description : Ribosomal protein L22/L17 [Interproscan].

Gene families : OG_01_0003841 (OrthoFinder) Phylogenetic Tree(s): OG0003841_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0001s0273.1
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001215.8	tig00001215_g7572.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder
Cre13.g568900	30784330, RPL17	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	OrthoFinder
Cz08g22070.t1	No alias	Ribosomal protein L22/L17 [Interproscan].	0.08	OrthoFinder
Dusal.0117s00014.1	33191086	Ribosomal protein L22/L17 [Interproscan].	0.07	OrthoFinder
EOD18576	No alias	Ribosomal protein L22/L17 [Interproscan].	0.02	OrthoFinder
OT_06G03040.1	No alias	Ribosomal protein L22/L17 [Interproscan].	0.04	OrthoFinder
PTI_15G02710.1	No alias	Ribosomal protein L22/L17 [Interproscan].	0.1	OrthoFinder
Sro490_g153560.1	Contig328.g4376	60S ribosomal protein L17	0.09	OrthoFinder
SymbC1.scaffold1979.3	1979.3	Ribosomal protein L22/L17 [Interproscan].	0.02	OrthoFinder
TP03G04610.1	No alias	Ribosomal protein L22/L17 [Interproscan].	0.07	OrthoFinder
XM_002499746.1	MICPUN_93345, 93345	Ribosomal protein L22/L17 [Interproscan].	0.03	OrthoFinder
lcl\|LHPG02000008.1_cds_PRW56515.1_9742	PRW56515	60S ribosomal L17-2	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8499482.1_8435	KAA8499482	60S ribosomal protein L17	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001063	Ribosomal_L22	17	152

External Links

No external refs found!

Vocar.0001s0273.1 (32884978)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation