Vocar.0001s0272.1 (32886173)


Aliases : 32886173

Description : Signal recognition particle, SRP54 subunit, M-domain; Signal recognition particle, SRP54 subunit, GTPase domain; Signal recognition particle SRP54, helical bundle [Interproscan].


Gene families : OG_01_0003509 (OrthoFinder) Phylogenetic Tree(s): OG0003509_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0272.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
XM_002504313.1 MICPUN_85222, 85222 Type II secretory pathway family (SRP54.2) 0.03 OrthoFinder
lcl|BLLF01001677.1_cds_GFH20669.1_15146 HaLaN_17828, GFH20669 Signal recognition particle 54 kDa protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
MF GO:0008312 7S RNA binding IEA Interproscan
CC GO:0048500 signal recognition particle IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0009976 tocopherol cyclase activity IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000897 SRP54_GTPase_dom 106 300
IPR004125 Signal_recog_particle_SRP54_M 333 432
IPR013822 Signal_recog_particl_SRP54_hlx 6 83
No external refs found!