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  5. Vocar.0001s0246.1

Vocar.0001s0246.1 (32884851)


Aliases : 32884851

Description : Ribosomal protein L21-like [Interproscan].


Gene families : OG_01_0001206 (OrthoFinder) Phylogenetic Tree(s): OG0001206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0246.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cre06.g299000 30778575, PRPL21 50S ribosomal protein L21, chloroplastic OS=Staurastrum... 0.16 OrthoFinder
Cz10g19180.t1 No alias Ribosomal protein L21-like [Interproscan]. 0.08 OrthoFinder
Cz10g19190.t1 No alias Hypothetical protein 0.11 OrthoFinder
Dusal.0098s00017.1 33203615 Ribosomal protein L21-like [Interproscan]. 0.02 OrthoFinder
OT_01G04440.1 No alias Ribosomal protein L21-like [Interproscan]. 0.02 OrthoFinder
OT_07G01800.1 No alias Ribosomal protein L21-like [Interproscan]. 0.08 OrthoFinder
Sro1170_g248760.1 Contig3531.g27305 Protein L21 0.03 OrthoFinder
Sro51_chlor_g029900.1 Rpl21 Rpl21 0.04 OrthoFinder
TPCG01970.1 No alias Ribosomal protein L21-like [Interproscan]. 0.04 OrthoFinder
TPCG03020.1 No alias Ribosomal protein L21-like [Interproscan]. 0.04 OrthoFinder
XM_002500115.1 MICPUN_89975, 89975 Ribosomal protein L21 0.08 OrthoFinder
XM_003058097.1 MicpuC2_47061, 47061 Ribosomal protein L21-like [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01004819.1_cds_GFH30299.1_24776 HaLaN_29126, GFH30299 Plastid/chloroplast ribosomal protein L21 0.02 OrthoFinder
lcl|BLLF01006389.1_cds_GFH32203.1_26680 HaLaN_31385, GFH32203 Plastid/chloroplast ribosomal protein L21 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61049.1_51 PRW61049 50S ribosomal L21 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028909 L21p-like 77 176
No external refs found!