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  5. Vocar.0001s0172.1

Vocar.0001s0172.1 (32885785)


Aliases : 32885785

Description : Vesicle transport v-SNARE, N-terminal; Snare region anchored in the vesicle membrane C-terminus [Interproscan].


Gene families : OG_01_0000810 (OrthoFinder) Phylogenetic Tree(s): OG0000810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0172.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000005.1_cds_PRW58605.1_7878 PRW58605 Alkaline phosphatase isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 15 92
No external refs found!