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Aliases : 32884580
Description : Zinc finger, RING-type [Interproscan].
Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0001s0082.1 | |
| Cluster | HCCA: Cluster_120 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre08.g371400 | 30773476 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder | |
| Cre11.g476250 | 30775659 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder | |
| Cz09g32110.t1 | No alias | Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_01G05830.1 | No alias | Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| TP16G00120.1 | No alias | Zinc finger, RING-type [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_56851 | 56851 | Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0006s0216.1 | 32894307 | Zinc finger, RING-type [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0032s0095.1 | 32893807 | Zinc finger, RING-type [Interproscan]. | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | Enrichment |
| MF | GO:0005543 | phospholipid binding | IEP | Enrichment |
| CC | GO:0005956 | protein kinase CK2 complex | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| MF | GO:0008289 | lipid binding | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| MF | GO:0019207 | kinase regulator activity | IEP | Enrichment |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Enrichment |
| BP | GO:0030328 | prenylcysteine catabolic process | IEP | Enrichment |
| BP | GO:0030329 | prenylcysteine metabolic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | Enrichment |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Enrichment |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 320 | 361 |
| No external refs found! |