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  5. Vocar.0001s0054.1

Vocar.0001s0054.1 (32884222)


Aliases : 32884222

Description : RAP domain [Interproscan].


Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0054.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cz08g16170.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz19g02050.t1 No alias RAP domain [Interproscan]. 0.02 OrthoFinder
EOD25392 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
Vocar.0020s0010.1 32886796 RAP domain [Interproscan]. 0.03 OrthoFinder
XM_003057346.1 MicpuC2_46785, 46785 RAP domain [Interproscan]. 0.02 OrthoFinder
XM_003058842.1 MicpuC2_70781, 70781 RAP domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006906 vesicle fusion IEP Enrichment
BP GO:0007030 Golgi organization IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016050 vesicle organization IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0035658 Mon1-Ccz1 complex IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Enrichment
BP GO:0048284 organelle fusion IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0061025 membrane fusion IEP Enrichment
BP GO:0090174 organelle membrane fusion IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
InterPro domains Description Start Stop
IPR013584 RAP 1286 1343
No external refs found!