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  5. TPCG03020.1

TPCG03020.1


Description : Ribosomal protein L21-like [Interproscan].


Gene families : OG_01_0001206 (OrthoFinder) Phylogenetic Tree(s): OG0001206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TPCG03020.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre06.g299000 30778575, PRPL21 50S ribosomal protein L21, chloroplastic OS=Staurastrum... 0.09 OrthoFinder
Cre09.g388550 30780235, MRPL21 No description available 0.05 OrthoFinder
Cz10g19180.t1 No alias Ribosomal protein L21-like [Interproscan]. 0.09 OrthoFinder
Cz10g19190.t1 No alias Hypothetical protein 0.05 OrthoFinder
Dusal.0098s00017.1 33203615 Ribosomal protein L21-like [Interproscan]. 0.02 OrthoFinder
OT_07G01800.1 No alias Ribosomal protein L21-like [Interproscan]. 0.07 OrthoFinder
Sro1170_g248760.1 Contig3531.g27305 Protein L21 0.03 OrthoFinder
Sro51_chlor_g029900.1 Rpl21 Rpl21 0.13 OrthoFinder
Vocar.0001s0246.1 32884851 Ribosomal protein L21-like [Interproscan]. 0.04 OrthoFinder
XM_002500115.1 MICPUN_89975, 89975 Ribosomal protein L21 0.07 OrthoFinder
XM_003058097.1 MicpuC2_47061, 47061 Ribosomal protein L21-like [Interproscan]. 0.04 OrthoFinder
XM_003062473.1 MicpuC2_51973, 51973 Ribosomal L21 protein, chloroplast precursor 0.02 OrthoFinder
lcl|BLLF01006389.1_cds_GFH32203.1_26680 HaLaN_31385, GFH32203 Plastid/chloroplast ribosomal protein L21 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028909 L21p-like 3 102
No external refs found!