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  5. TPCG02610.1

TPCG02610.1


Description : Ribosomal protein L18 [Interproscan].


Gene families : OG_01_0004009 (OrthoFinder) Phylogenetic Tree(s): OG0004009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TPCG02610.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre01.g052100 30788991, PRPL18 Protein biosynthesis.organelle translation... 0.09 OrthoFinder
Cz09g08170.t1 No alias Ribosomal protein L18 [Interproscan]. 0.08 OrthoFinder
Dusal.0423s00013.1 33192022 Ribosomal protein L18 [Interproscan]. 0.02 OrthoFinder
OT_07G04560.1 No alias Ribosomal protein L18 [Interproscan]. 0.08 OrthoFinder
Sro51_chlor_g029630.1 Rpl18 Rpl18 0.13 OrthoFinder
Vocar.0001s0412.1 32884219 Ribosomal protein L18 [Interproscan]. 0.06 OrthoFinder
XM_002503130.1 MICPUN_59217, 59217 Ribosomal protein L18 (RPL18.1) 0.08 OrthoFinder
XM_003061146.1 MicpuC2_28274, 28274 Ribosomal protein L18 [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56666.1_9892 PRW56666 50S ribosomal L18 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 24 135
No external refs found!