Aliases : tig00000241_g20886.t1
Description : U2 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana
Gene families : OG_01_0004993 (OrthoFinder) Phylogenetic Tree(s): OG0004993_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00000241.28 | |
Cluster | HCCA: Cluster_31 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre16.g679600 | 30777798 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder | |
EOD08277 | No alias | Leucine-rich repeat [Interproscan]. | 0.01 | OrthoFinder | |
PTI_07G03370.1 | No alias | Leucine-rich repeat [Interproscan]. | 0.02 | OrthoFinder | |
TP13G02380.1 | No alias | Leucine-rich repeat [Interproscan]. | 0.02 | OrthoFinder | |
XM_002505885.1 | MICPUN_88148, 88148 | Leucine-rich repeat [Interproscan]. | 0.01 | OrthoFinder | |
XM_003057174.1 | MicpuC2_11284, 11284 | Leucine-rich repeat [Interproscan]. | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Enrichment |
CC | GO:0005694 | chromosome | IEP | Enrichment |
CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Enrichment |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Enrichment |
BP | GO:0006457 | protein folding | IEP | Enrichment |
BP | GO:0006605 | protein targeting | IEP | Enrichment |
BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006621 | protein retention in ER lumen | IEP | Enrichment |
MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
BP | GO:0032507 | maintenance of protein location in cell | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Enrichment |
BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
BP | GO:0045185 | maintenance of protein location | IEP | Enrichment |
MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
BP | GO:0051235 | maintenance of location | IEP | Enrichment |
BP | GO:0051651 | maintenance of location in cell | IEP | Enrichment |
BP | GO:0051668 | localization within membrane | IEP | Enrichment |
BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Enrichment |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
No InterPro domains available for this sequence
No external refs found! |