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Description : Pentatricopeptide repeat [Interproscan].
Gene families : OG_01_0008080 (OrthoFinder) Phylogenetic Tree(s): OG0008080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP12G01970.1 | |
| Cluster | HCCA: Cluster_119 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_06G03350.1 | No alias | Pentatricopeptide repeat [Interproscan]. | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004832 | valine-tRNA ligase activity | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| CC | GO:0005886 | plasma membrane | IEP | Enrichment |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Enrichment |
| BP | GO:0005991 | trehalose metabolic process | IEP | Enrichment |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Enrichment |
| BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | Enrichment |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| No external refs found! |