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  5. Cpa|evm.model.tig00000241.178

Cpa|evm.model.tig00000241.178 (tig00000241_g21049.t1)


Aliases : tig00000241_g21049.t1

Description : Cell cycle.interphase.DNA replication.elongation.DNA polymerase delta complex.POLD2 component


Gene families : OG_01_0002490 (OrthoFinder) Phylogenetic Tree(s): OG0002490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000241.178
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre08.g374050 30774111 Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 OrthoFinder
Cz19g07070.t1 No alias DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.02 OrthoFinder
EOD30076 No alias DNA polymeras-like protein subunit POLD2 [Ensembl]. 0.06 OrthoFinder
PTI_13G03970.1 No alias DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.02 OrthoFinder
TP06G02370.1 No alias DNA polymerase delta subunit, OB-fold domain; DNA... 0.02 OrthoFinder
Transcript_contig_54861 54861 DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.04 OrthoFinder
Vocar.0036s0127.1 32892168 DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.03 OrthoFinder
XM_002505166.1 MICPUN_86679, 86679 DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.07 OrthoFinder
XM_003060360.1 MicpuC2_19376, 19376 DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR040663 DNA_pol_D_N 30 161
IPR007185 DNA_pol_a/d/e_bsu 183 401
No external refs found!