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  5. TP08G03720.1

TP08G03720.1


Description : E3 ligase, CCCH-type zinc finger; Zinc finger, CCCH-type; Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0002730 (OrthoFinder) Phylogenetic Tree(s): OG0002730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP08G03720.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
EOD05244 No alias Zinc finger, CCCH-type [Interproscan]. 0.02 OrthoFinder
XM_002503977.1 MICPUN_108666, 108666 Zinc finger, CCCH-type; E3 ligase, CCCH-type zinc finger... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0015708 silicic acid import across plasma membrane IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Enrichment
MF GO:0047750 cholestenol delta-isomerase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:0098657 import into cell IEP Enrichment
BP GO:0098661 inorganic anion transmembrane transport IEP Enrichment
BP GO:0098739 import across plasma membrane IEP Enrichment
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 53 73
IPR001841 Znf_RING 93 143
IPR000571 Znf_CCCH 16 39
No external refs found!