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  5. TP06G02620.1

TP06G02620.1


Description : Proteasome, subunit alpha/beta; Proteasome alpha-subunit, N-terminal domain [Interproscan].


Gene families : OG_01_0002071 (OrthoFinder) Phylogenetic Tree(s): OG0002071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G02620.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.21 tig00000217_g19154.t1 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.07 OrthoFinder
Cre06.g304300 30779553, POA6 Protein degradation.26S proteasome.20S core... 0.2 OrthoFinder
Cz08g17010.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.09 OrthoFinder
EOD07672 No alias Proteasome alpha-subunit, N-terminal domain [Interproscan]. 0.09 OrthoFinder
EOD17162 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_08G04270.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.25 OrthoFinder
PTI_08G04350.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.23 OrthoFinder
Sro17_g012260.1 Contig269.g3405 Proteasome subunit alpha type-1 0.3 OrthoFinder
SymbC1.scaffold4308.2 4308.2 Proteasome, subunit alpha/beta; Proteasome... 0.01 OrthoFinder
Transcript_contig_58532 58532 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder
Vocar.0020s0163.1 32886732 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.07 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32598.1_4029 PRW32598 Proteasome subunit alpha type-1-B-like isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 6 27
IPR001353 Proteasome_sua/b 29 214
No external refs found!