TP05G05870.1


Description : FACT complex subunit POB3-like, N-terminal PH domain; Domain of unknown function DUF1747; SSRP1 domain; High mobility group box domain [Interproscan].


Gene families : OG_01_0001888 (OrthoFinder) Phylogenetic Tree(s): OG0001888_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP05G05870.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.93 tig00000076_g2391.t1 Chromatin organisation.histone chaperone activities.FACT... 0.02 OrthoFinder
Cz06g12230.t1 No alias Domain of unknown function DUF1747; FACT complex subunit... 0.01 OrthoFinder
Dusal.0414s00001.1 33185365 Domain of unknown function DUF1747; SSRP1 domain; High... 0.02 OrthoFinder
EOD09756 No alias SSRP1 domain; Domain of unknown function DUF1747; FACT... 0.04 OrthoFinder
EOD18097 No alias SSRP1 domain; Domain of unknown function DUF1747; FACT... 0.04 OrthoFinder
OT_14G01280.1 No alias SSRP1 domain; High mobility group box domain; Domain of... 0.02 OrthoFinder
Sro1996_g310030.1 Contig3556.g27464 FACT complex subunit SSRP1 0.01 OrthoFinder
SymbC1.scaffold4357.3 4357.3 EF-hand domain; SPX domain; EXS, C-terminal [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0906.1 32884654 High mobility group box domain; Domain of unknown... 0.01 OrthoFinder
XM_002505740.1 MICPUN_63692, 63692 Histone chaperone 0.04 OrthoFinder
XM_003063780.1 MicpuC2_22975, 22975 Histone chaperone 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR035417 POB3_N 9 76
IPR009071 HMG_box_dom 541 608
IPR009071 HMG_box_dom 640 708
IPR013719 DUF1747 331 428
IPR024954 SSRP1_dom 84 153
No external refs found!